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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. B3gnt2, UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2
Sequence ID:NM_001169114
NM_016888
Entrez Gene ID:53625
Ensembl ID:ENSMUSG00000051650

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, kidney, lung, lymph node, lymphoreticular, mammary gland, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, skin, soft tissue, spleen, stem cell, stomach, t-cell, testis, thymus, uncharacterized tissue, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:11 A3.2|11 12.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:11: 22835955 - 22859513

 Exon Info From UCSC:
NM_001169114
NM_016888

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2654354Full LengthBC009075UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_058584  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001169114 NP_001162585    
NM_016888 NP_058584 Q9Z222 Galactosyl_T

Related Sequences

 
mRNAGenPeptSwissProt
AF092050 AAD09763 Q9Z222
BC009075 AAH09075 Q9Z222
AY043479 AAK95359 Q9Z222
AK160088 BAE35619 Q3TVJ9
Q9Z222

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus B3gnt2 NP_001162585 R.norvegicus B3gnt2 305571   NP_001100710 97
H.sapiens B3GNT2 10678 Gene Info NP_006568 87

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)