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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Aff4, AF4/FMR2 family, member 4
Sequence ID:NM_033565
Entrez Gene ID:93736
Ensembl ID:ENSMUSG00000049470

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:11 B1.3|11

Chromosomal Position (from UCSC)

Chromosomal Position:11: 53350832 - 53421830

 Exon Info From UCSC:
NM_033565

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8862021Full LengthBC138999AF4/FMR2 family, member 4
9054053Full LengthBC145490AF4/FMR2 family, member 4
1245708IncompleteBC038678AF4/FMR2 family, member 4

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_291043  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_033565 NP_291043 Q9ESC8 AF-4

Related Sequences

 
mRNAGenPeptSwissProt
AF190449 AAG17126 Q9ESC8
BC138999 AAI39000 Q9ESC8
BC145490 AAI45491 B7ZNX0
AK033163 BAC28178 Q9ESC8
AK053034 BAC35244 Q9ESC8
AK054401 BAC35763 Q9ESC8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Aff4 NP_291043 R.norvegicus Aff4 303132   NP_001100471 97
H.sapiens AFF4 27125 Gene Info NP_055238 94
D.melanogaster lilli 33496   NP_001137772 26

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)