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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Ptpn22, Protein tyrosine phosphatase, non-receptor type 22 (lymphoid)
Sequence ID:NM_008979
Entrez Gene ID:19260
Ensembl ID:ENSMUSG00000027843

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3|3 F3

Chromosomal Position (from UCSC)

Chromosomal Position:3: 103878056 - 103879889

 Exon Info From UCSC:
NM_008979

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30077916Full LengthBC055377protein tyrosine phosphatase, non-receptor type 22 (lymphoid)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033005  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_008979 NP_033005 P29352 EC 3.1.3.48 Y_phosphatase

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
M90388 AAA39994 P29352 EC 3.1.3.48
BC055377 AAH55377 P29352 EC 3.1.3.48
AK169559 BAE41229 Q3TEL9  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ptpn22 NP_033005 R.norvegicus Ptpn22 295338   NP_001099930 88
H.sapiens PTPN22 26191 Gene Info NP_057051 72

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)