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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Syn3, synapsin III
Sequence ID:NM_001164495
NM_013722
Entrez Gene ID:27204
Ensembl ID:ENSMUSG00000059602

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:10|10 C2

Chromosomal Position (from UCSC)

Chromosomal Position:10: 86055508 - 86498839

 Exon Info From UCSC:
NM_001164495
NM_013722

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40058225Full LengthBC107397synapsin III

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_038750  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001164495 NP_001157967    
NM_013722 NP_038750 Q9QZA3
Q8JZP2
Synapsin_N
Synapsin_C

Related Sequences

 
mRNAGenPeptSwissProt
AF192754 AAF08812 Q9QZA3
BC107397 AAI07398 Q3KN99
AF498252 AAM22969 Q8JZP2
AF498253 AAM22970 Q8JZP2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Syn3 NP_038750 R.norvegicus Syn3 29130   NP_058805 99
H.sapiens SYN3 8224 Gene Info NP_003481 92

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)