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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Mm. Trappc11, trafficking protein particle complex 11
Sequence ID:NM_177240
Entrez Gene ID:320714
Ensembl ID:ENSMUSG00000038102

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data

Cytogenetic Location (from UniGene)

Cytogenetic Location:8 B1.1|8

Chromosomal Position (from UCSC)

Chromosomal Position:8: 47490672 - 47533467

 Exon Info From UCSC:

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9056419Full LengthBC147504RIKEN cDNA D030016E14 gene
9088048Full LengthBC151159RIKEN cDNA D030016E14 gene
5716068IncompleteBC094246RIKEN cDNA D030016E14 gene

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_796214  

Protein Infomation

NM_177240 NP_796214 B2RXC1 DUF1683

Related Sequences

BC094246 AAH94246 B2RXC1
BC147504 AAI47505 B2RXC1
BC151159 AAI51160 B2RXC1
AK042816 BAC31370 B2RXC1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
M.musculus D030016E14Rik NP_796214 R.norvegicus RGD1309765 290746   NP_001162586 97
H.sapiens TRAPPC11 60684 Gene Info NP_068761 94
D.melanogaster gry 38391   NP_728832 38
A.gambiae AgaP_AGAP006517 1277115   XP_316549 37
C.elegans B0412.3 175236   NP_497264 32
A.thaliana AT5G65950 836725   NP_201396 28

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)