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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Thpo, thrombopoietin
Sequence ID:NM_001173505
NM_009379
Entrez Gene ID:21832
Ensembl ID:ENSMUSG00000022847

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:16 B1|16 13.8 cM

Chromosomal Position (from UCSC)

Chromosomal Position:16: 20724453 - 20734511

 Exon Info From UCSC:
NM_001173505
NM_009379

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3593885Full LengthBC003803thrombopoietin

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033405  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001173505 NP_001166976    
NM_009379 NP_033405 Q543R9
P40226
EPO_TPO

Related Sequences

 
mRNAGenPeptSwissProt
L34169 AAA40436 Q543R9
P40226
BC003803 AAH03803 Q543R9
P40226
AK047512 BAC33078 Q543R9
P40226

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Thpo NP_033405 R.norvegicus Thpo 81811   NP_112395 89
H.sapiens THPO 7066 Gene Info NP_001171068 73

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta