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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Eif4e, eukaryotic translation initiation factor 4E
Sequence ID:NM_007917
Entrez Gene ID:13684
Ensembl ID:ENSMUSG00000028156

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, t-cell, testis, thymus, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:3 G3-H1|3 25.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:3: 138527283 - 138557599

NM_007917 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1104138189154138189257
105151138190231138190277
152258138209284138209390
259354138210622138210717
355418138213226138213289
419532138213856138213969
533672138216545138216684
6732882138218353138220562

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4216609Full LengthBC010759eukaryotic translation initiation factor 4E
6438419Full LengthBC085087eukaryotic translation initiation factor 4E

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_031943  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_007917 NP_031943 Q3TK95
P63073
IF4E

Related Sequences

 
mRNAGenPeptSwissProt
M61731 AAA37545 Q3TK95
P63073
BC010759 AAH10759 Q3TK95
P63073
BC085087 AAH85087 Q3TK95
P63073
AK082867 BAC38660 Q8C470
AK133004 BAE21465 Q3V0N9
AK167097 BAE39250 Q3TK95
P63073

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Eif4e NP_031943 R.norvegicus Eif4e 117045   NP_446426 100
H.sapiens EIF4E 1977 Gene Info NP_001124150 98
A.gambiae AgaP_AGAP007172 1269944   XP_308598 53
D.melanogaster eIF4E-7 31059   NP_726718 50
D.melanogaster eIF-4E 45525   NP_729484 49
D.melanogaster eIF4E-4 38743   NP_648052 47
A.thaliana EIF4E 827529   NP_193538 44
D.melanogaster eIF4E-5 38878   NP_648160 43
D.melanogaster eIF4E-3 38923   NP_648194 43

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta