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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Cotl1, coactosin-like 1 (Dictyostelium)
Sequence ID:NM_028071
Entrez Gene ID:72042
Ensembl ID:ENSMUSG00000031827

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, nervous, ovary, pancreas, peripheral nervous system, placenta, pooled tissue, retina, skin, soft tissue, spleen, stem cell, stomach, synovium, testis, thymus, uncharacterized tissue, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:8 E1|8

Chromosomal Position (from UCSC)

Chromosomal Position:8: 119809224 - 119840540

NM_028071 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
41145122333113122334254
11461303122346553122346710
13041386122364041122364123
13871642122364223122364478

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3155195Full LengthBC010249coactosin-like 1 (Dictyostelium)
3157387Full LengthBC011068coactosin-like 1 (Dictyostelium)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_082347  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_028071 NP_082347 Q9CQI6
Q544F6
Cofilin_ADF

Related Sequences

 
mRNAGenPeptSwissProt
BC010249 AAH10249 Q9CQI6
Q544F6
BC011068 AAH11068 Q9CQI6
Q544F6
AK007994 BAB25396 Q9CQI6
Q544F6
AK008085 BAB25450 Q9CQI6
Q544F6
AK010052 BAB26668 Q9CQI6
Q544F6
AK039644 BAC30407 Q9CQI6
Q544F6
AK148854 BAE28680 Q9CQI6
Q544F6
AK150888 BAE29935 Q9CQI6
Q544F6
AK151690 BAE30614 Q9CQI6
Q544F6
AK157694 BAE34154 Q9CQI6
Q544F6
AK172403 BAE42989 Q9CQI6
Q544F6
CT010261 CAJ18469 Q9CQI6
Q544F6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Cotl1 NP_082347 R.norvegicus Cotl1 361422   NP_001101922 99
H.sapiens COTL1 23406 Gene Info NP_066972 95
A.gambiae AgaP_AGAP000889 1277406   XP_316866 45
D.melanogaster CG6891 32865   NP_573323 44

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)