Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Atg4a, autophagy related 4A, cysteine peptidase
Sequence ID:NM_174875
Entrez Gene ID:666468
Ensembl ID:ENSMUSG00000079418

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:X F1|X

Chromosomal Position (from UCSC)

Chromosomal Position:3: 103644832 - 103646023

 Exon Info From UCSC:
NM_174875

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30286094Full LengthBC089500autophagy-related 4A (yeast)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_777364  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_174875 NP_777364 Q8C9S8
Q5EBK1
Peptidase_C54

Related Sequences

 
mRNAGenPeptSwissProt
BC089500 AAH89500 Q8C9S8
Q5EBK1
AK041379 BAC30924 Q8C9S8
AK162404 BAE36898 Q8C9S8
Q5EBK1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Atg4a NP_777364 H.sapiens ATG4A 115201 Gene Info NP_443168 93
D.melanogaster Atg4 33283   NP_608563 47
A.gambiae AgaP_AGAP008497 1277474   XP_316946 46
C.elegans atg-4.1 190777   NP_493375 45

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)