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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Aldh5a1, aldhehyde dehydrogenase family 5, subfamily A1
Sequence ID:NM_172532
Entrez Gene ID:214579
Ensembl ID:ENSMUSG00000035936

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:13 A3.1

Chromosomal Position (from UCSC)

Chromosomal Position:13: 24907671 - 24908956

NM_172532 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
241882499944825003634
418942472500411625004174
424844172500561225005781
441845762500763025007788
457747202501036925010512
472148642501154725011690
486549812501583525015951
498251522501784625018016
515352362501940925019492
523756472502911925029529

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8861725Full LengthBC138703aldhehyde dehydrogenase family 5, subfamily A1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_766120  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_172532 NP_766120 Q8BWF0 EC 1.2.1.24 Aldedh

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC138703 AAI38704 B2RS41  
AK052703 BAC35105 Q8BWF0 EC 1.2.1.24
AK144030 BAE25663 Q8BWF0 EC 1.2.1.24

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Aldh5a1 NP_766120 R.norvegicus Aldh5a1 291133   XP_214478 95
H.sapiens ALDH5A1 7915 Gene Info NP_733936 86
N.crassa NCU00936 3880915   XP_964762 59
A.thaliana ALDH5F1 844282   NP_178062 58
A.gambiae AgaP_AGAP003165 1273834   XP_312856 54
D.melanogaster Ssadh 43092   NP_001014666 53
S.pombe SPAC1002.12c 2543267   NP_593499 53
C.elegans alh-7 174991   NP_496837 50
S.cerevisiae UGA2 852291   NP_009560 49

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)