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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Clock, circadian locomotor output cycles kaput
Sequence ID:NM_007715
Entrez Gene ID:12753
Ensembl ID:ENSMUSG00000029238

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5 C3.3|5 43.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:5: 76209870 - 76211222

 Exon Info From UCSC:
NM_007715

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100062237Full LengthBC156741circadian locomoter output cycles kaput
100015416BC148468circadian locomoter output cycles kaput

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_007715 NP_031741 O08785 EC 2.3.1.48 HLH
PAS
PAS_3

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF000998 AAC53200 O08785 EC 2.3.1.48
BC148468 AAI48469    
BC156741 AAI56742    
AY118227 AAM78583 Q8K1L9  
AK040337 BAC30568 Q8C9W6  
AK041303 BAC30897 Q8BRU1  
AK129118 BAC97928 Q6ZQD6  
AK136367 BAE22949 Q3UWG6  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Clock NP_031741 H.sapiens CLOCK 9575 Gene Info NP_004889 97
R.norvegicus Clock 60447   NP_068628 97
A.gambiae AgaP_AGAP005711 1276380   XP_315720 43
D.melanogaster Clk 38872   NP_001014576 38

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta