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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Prox1, prospero-related homeobox 1
Sequence ID:NM_008937
Entrez Gene ID:19130
Ensembl ID:ENSMUSG00000010175

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1 H6|1 106.3 cM

Chromosomal Position (from UCSC)

Chromosomal Position:1: 190118351 - 190121147

NM_008937 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
141640191945657191947283
16411835191970830191971024
18361941191977294191977399
19423735191984398191986191
37364148191994146191994558

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6490801Full LengthBC051411prospero-related homeobox 1

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_008937 NP_032963 P48437 Prox1

Related Sequences

 
mRNAGenPeptSwissProt
AF061576 AAC32824 P48437
BC051411 AAH51411 P48437
AK052889 BAC35190 P48437
AK143179 BAE25293 P48437

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Prox1 NP_032963 R.norvegicus Prox1 305066   NP_001100671 100
H.sapiens PROX1 5629 Gene Info NP_002754 98
C.elegans ceh-26 176137   NP_498760 33

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)