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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Sc5d, sterol-C5-desaturase (fungal ERG3, delta-5-desaturase) homolog (S. cerevisae)
Sequence ID:NM_172769
Entrez Gene ID:235293
Ensembl ID:ENSMUSG00000032018

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:9|9 B

Chromosomal Position (from UCSC)

Chromosomal Position:9: 42251594 - 42253088

NM_172769 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
116214206225942063879
162217224206418942064289
172318554206666342066795
185620734206776442067981
207421544207013342070213
215522494207228842072382

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5101986Full LengthBC024132sterol-C5-desaturase (fungal ERG3, delta-5-desaturase) homolog (S. cerevisae)

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_172769 NP_766357 Q8BGI0   Sterol_desat

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC024132 AAH24132 Q8R1S3  
AB016248 BAA33730 O88822 EC 1.14.21.6
AK043825 BAC31666 Q8BGI0  
AK077670 BAC36944 Q8BGI0  
AK154309 BAE32506 Q8R1S3  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Sc5d NP_766357 R.norvegicus Sc5dl 114100   NP_446094 95
H.sapiens SC5DL 6309 Gene Info NP_001020127 84
S.pombe erg3 2542109   NP_593135 55
N.crassa NCU06207 3879071   XP_962923 54
S.cerevisiae ERG3 850745   NP_013157 51

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)