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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Calu, calumenin
Sequence ID:NM_007594
NM_184053
Entrez Gene ID:12321
Ensembl ID:ENSMUSG00000029767

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:6 A3.3|6

Chromosomal Position (from UCSC)

Chromosomal Position:6: 29375077 - 29375388

 Exon Info From UCSC:
NM_007594
NM_184053

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3989906Full LengthBC051423calumenin

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_908942  NP_031620  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_007594 NP_031620 O35887
Q3TUF3
efhand
NM_184053 NP_908942 Q6XLQ8 efhand

Related Sequences

 
mRNAGenPeptSwissProt
U81829 AAC53316 O35887
Q3TUF3
BC051423 AAH51423 O35887
Q3TUF3
AY225334 AAO47343 Q6XLQ8
AK032402 BAC27852 Q8CCN9
AK035600 BAC29120 Q8CBP3
AK135295 BAE22480 O35887
Q3TUF3
AK147756 BAE28117 Q6XLQ8
AK148178 BAE28398 Q3UG11
AK160795 BAE36018 O35887
Q3TUF3
AK161807 BAE36584 O35887
Q3TUF3
AK163674 BAE37453 Q3TQD1
AK166705 BAE38959 Q3TL33

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Calu NP_908942 H.sapiens CALU 813 Gene Info NP_001186601 99
R.norvegicus Calu 64366   NP_001029070 99
A.gambiae AgaP_AGAP010392 1272654   XP_311555 59
C.elegans calu-1 180769   NP_001024806 51
D.melanogaster scf 38145   NP_477392 51

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)