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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Kdm5b, lysine (K)-specific demethylase 5B
Sequence ID:NM_152895
Entrez Gene ID:75605
Ensembl ID:ENSMUSG00000042207

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1 E4|1 72.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:1: 134632112 - 134635285

 Exon Info From UCSC:
NM_152895

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6826125Full LengthBC048180jumonji, AT rich interactive domain 1B (Rbp2 like)
6826125Full LengthBC057318jumonji, AT rich interactive domain 1B (Rbp2 like)
3711623IncompleteBC038625jumonji, AT rich interactive domain 1B (Rbp2 like)
4023951IncompleteBC019446jumonji, AT rich interactive domain 1B (Rbp2 like)

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_152895 NP_690855 Q80Y84 PHD
ARID
JmjC
JmjN
zf-C5HC2
PLU-1

Related Sequences

 
mRNAGenPeptSwissProt
BC019446 AAH19446 Q8VCQ4
BC048180 AAH48180 Q80Y84
BC057318 AAH57318 Q80Y84
AY082429 AAL92848 Q80Y84
AY082430 AAL92849 Q80Y84
AK008164 BAC25202 Q8C1P6
AK041304 BAC30898 Q80Y84
AK220451 BAD90482 Q80Y84
AK163481 BAE37363 Q3TQL9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Kdm5b NP_690855 R.norvegicus Kdm5b 304809   NP_001100647 97
H.sapiens KDM5B 10765 Gene Info NP_006609 94
C.elegans rbr-2 177985   NP_502032 34

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)