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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Abca4, ATP-binding cassette, sub-family A (ABC1), member 4
Sequence ID:NM_007378
Entrez Gene ID:11304
Ensembl ID:ENSMUSG00000028125

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3 G1|3 61.8 cM

Chromosomal Position (from UCSC)

Chromosomal Position:3: 122044459 - 122180061

 Exon Info From UCSC:
NM_007378

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6492139Full LengthBC057853ATP-binding cassette, sub-family A (ABC1), member 4
4504383IncompleteBC043937ATP-binding cassette, sub-family A (ABC1), member 4

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_031404  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_007378 NP_031404 O35600 ABC_tran

Related Sequences

 
mRNAGenPeptSwissProt
AF000149 AAC23916 O35600
BC043937 AAH43937 Q80VS6
BC057853 AAH57853 O35600
AK166397 BAE38753 Q3TLK5
AK166456 BAE38787 Q3TLK5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Abca4 NP_031404 R.norvegicus Abca4 310836   NP_001101191 95
H.sapiens ABCA4 24 Gene Info NP_000341 88
C.elegans abt-2 171782   NP_490949 35

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)