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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. -, Transcribed locus, strongly similar to NP_058849.1 40S ribosomal protein S3a [Rattus norvegicus]
Sequence ID:CA786489
Entrez Gene ID:100043780

Database Links

UniGeneEntrez GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, pineal gland, pituitary gland, placenta, pooled tissue, prostate, salivary gland, skin, soft tissue, spleen, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:Unknown

Chromosomal Position (from UCSC)

Chromosomal Position:14: 88122972 - 88123104


Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Gm10119 XP_001480995 M.musculus Rps3a 20091 Gene Info NP_058655 100
H.sapiens RPS3A 6189 Gene Info NP_000997 99
M.musculus Gm9000 668144 Gene Info XP_999639 99
R.norvegicus Rps3a 29288   NP_058849 99
A.gambiae RS3A_ANOGA 1274189   XP_313275 71
D.melanogaster RpS3A 43768   NP_524618 69
A.thaliana AT4G34670 829619   NP_195193 69
A.thaliana AT3G04840 819644   NP_187135 67
C.elegans rps-1 175584   NP_497910 65
N.crassa NCU01452 3872112   XP_955974 64
S.pombe rps102 2541737   NP_593116 61
S.pombe rps101 2542817   NP_592828 61
S.cerevisiae RPS1B 854939   NP_013648 60
P.falciparum PFC1020c 814544   XP_001351300 60
S.cerevisiae RPS1A 851162   NP_013546 59