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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Six3, sine oculis-related homeobox 3
Sequence ID:NM_011381
Entrez Gene ID:20473
Ensembl ID:ENSMUSG00000038805

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17 E4|17 45.5 cM

Chromosomal Position (from UCSC)

Chromosomal Position:17: 85620580 - 85622345

NM_011381 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
112158602017386021387
121636798602306686025529

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6402835Full LengthBC098096sine oculis-related homeobox 3 homolog (Drosophila)
6855602Full LengthBC094426sine oculis-related homeobox 3 homolog (Drosophila)

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_011381 NP_035511 Q62233 Homeobox

Related Sequences

 
mRNAGenPeptSwissProt
BC094426 AAH94426 Q52KB8
BC098096 AAH98096 Q62233
D83144 BAA11822 Q62233
D83145 BAA11823 Q62233
X90871 CAA62379 Q62233

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Six3 NP_035511 R.norvegicus Six3 78974   NP_076480 99
H.sapiens SIX3 6496 Gene Info NP_005404 98

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)