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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Ptprc, protein tyrosine phosphatase, receptor type, C
Sequence ID:NM_001111316
NM_001268286
NM_011210
Entrez Gene ID:19264
Ensembl ID:ENSMUSG00000026395

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1 E4|1 74.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:1: 138071257 - 138175305

 Exon Info From UCSC:
NM_001111316
NM_011210

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100068112Full LengthBC167212protein tyrosine phosphatase, receptor type, C
3326806IncompleteBC028512protein tyrosine phosphatase, receptor type, C
30750553IncompleteBC084684protein tyrosine phosphatase, receptor type, C

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001111316 NP_001104786    
NM_001268286 NP_001255215    
NM_011210 NP_035340    

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
M14342 AAA39458 P06800 EC 3.1.3.48
M92933 AAA39459 P06800 EC 3.1.3.48
M11934 AAA39461 P06800 EC 3.1.3.48
M15174 AAA40161 P06800 EC 3.1.3.48
M17320 AAA60449 P06800 EC 3.1.3.48
BC028512 AAH28512 Q05C79  
BC084684 AAH84684 Q5XFY7  
BC167212 AAI67212    
EF101553 ABK96802 A1E2H6  
AK054056 BAC35638 Q8C6Q7  
AK154893 BAE32907 Q3U382  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ptprc NP_001104786 R.norvegicus Ptprc 24699   NP_612516 80
H.sapiens PTPRC 5788 Gene Info NP_002829 70

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta