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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Clec9a, C-type lectin domain family 9, member a
Sequence ID:NM_001205363
NM_001205364
NM_001205365
NM_172732
Entrez Gene ID:232414
Ensembl ID:ENSMUSG00000046080

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6 F3|6

Chromosomal Position (from UCSC)

Chromosomal Position:6: 129408861 - 129424762

Transcript StartTranscript EndChromosomal Start Chromosomal End
1183129358880129359062
184264129360292129360372
265405129365238129365378
406557129369499129369650
558676129371061129371179
6771156129372243129372722

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30119997Full LengthBC087955C-type lectin domain family 9, member a

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_766320  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001205363 NP_001192292    
NM_001205364 NP_001192293    
NM_001205365 NP_001192294    
NM_172732 NP_766320 Q8BRU4 Lectin_C

Related Sequences

 
mRNAGenPeptSwissProt
BC087955 AAH87955 Q8BRU4
EU339277 ABZ04558 Q8BRU4
EU339278 ABZ04559 Q8BRU4
EU339279 ABZ04560 Q8BRU4
EU339280 ABZ04561 Q8BRU4
EU339281 ABZ04562 Q8BRU4
AK036399 BAC29411 Q8BRU4
AK041288 BAC30890 Q8BRU4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Clec9a NP_766320 R.norvegicus Clec9a 502901   NP_001102824 82
H.sapiens CLEC9A 283420 Gene Info NP_997228 60

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)