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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Pmch, pro-melanin-concentrating hormone
Sequence ID:NM_029971
Entrez Gene ID:110312
Ensembl ID:ENSMUSG00000035383

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:10 C2|10 47.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:10: 88091074 - 88092373

NM_029971 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
13148755381687554129
3155138755443287554630
5147488755488487555118

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6533154Full LengthBC048534pro-melanin-concentrating hormone

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_084247  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_029971 NP_084247 Q9D220 Pro-MCH

Related Sequences

 
mRNAGenPeptSwissProt
BC048534 AAH48534 Q80ZR6
AK020723 BAB32189 Q9D220
AK138363 BAE23633 Q9D220

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Pmch NP_084247 R.norvegicus Pmch 24659   NP_036757 93
H.sapiens PMCH 5367 Gene Info NP_002665 87

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)