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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Mpp1, membrane protein, palmitoylated
Sequence ID:NM_008621
Entrez Gene ID:17524
Ensembl ID:ENSMUSG00000031402

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:X A7.3|X 30.48 cM

Chromosomal Position (from UCSC)

Chromosomal Position:X: 75110784 - 75130832

 Exon Info From UCSC:
NM_008621

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4221660Full LengthBC013444membrane protein, palmitoylated
8861334Full LengthBC138314membrane protein, palmitoylated
8861335Full LengthBC138315membrane protein, palmitoylated

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_032647  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_008621 NP_032647 Q542P4
P70290
PDZ
Guanylate_kin
SH3_2

Related Sequences

 
mRNAGenPeptSwissProt
U38196 AAC52970 Q542P4
P70290
BC013444 AAH13444 Q542P4
P70290
BC138314 AAI38315 Q542P4
BC138315 AAI38316 Q542P4
AK048532 BAC33363 Q542P4
P70290
AK081829 BAC38344 Q542P4
P70290
AK152379 BAE31168 Q542P4
P70290
AK168352 BAE40289 Q3THA8
AJ627041 CAF25310 Q684Q6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Mpp1 NP_032647 H.sapiens MPP1 4354 Gene Info NP_002427 93

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)