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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Pde6a, phosphodiesterase 6A, cGMP-specific, rod, alpha
Sequence ID:NM_146086
Entrez Gene ID:225600
Ensembl ID:ENSMUSG00000024575

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:18 E1|18 31.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:18: 61275022 - 61289025

 Exon Info From UCSC:
NM_146086

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4501123Full LengthBC031925phosphodiesterase 6A, cGMP-specific, rod, alpha
4527430Full LengthBC044892phosphodiesterase 6A, cGMP-specific, rod, alpha
9007394Full LengthBC158126phosphodiesterase 6A, cGMP-specific, rod, alpha

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_666198  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_146086 NP_666198 Q8K0A8   PDEase_I
GAF

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC031925 AAH31925 Q8K0A8  
BC044892 AAH44892 Q8K0A8  
BC158126 AAI58127 B2RY78  
AK042142 BAC31183 Q8C9G0  
X60664 CAA43072 P27664 EC 3.1.4.35

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Pde6a NP_666198 R.norvegicus Pde6a 307401   NP_001100856 99
H.sapiens PDE6A 5145 Gene Info NP_000431 95

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)