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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Runx2, runt related transcription factor 2
Sequence ID:NM_001271633
NM_001145920
NM_001146038
NM_001271627
NM_001271630
NM_001271631
NM_009820
NR_073392
NR_073425
Entrez Gene ID:12393
Ensembl ID:ENSMUSG00000039153

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17 B3|17 28.07 cM

Chromosomal Position (from UCSC)

Chromosomal Position:17: 44607530 - 44814581

 Exon Info From UCSC:
NM_001145920
NM_001146038
NM_009820

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100069523Full LengthBC172715runt related transcription factor 2
100069415BC172607runt related transcription factor 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033950  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001145920 NP_001139392    
NM_001146038 NP_001139510    
NM_001271627 NP_001258556    
NM_001271630 NP_001258559    
NM_001271631 NP_001258560    
NM_009820 NP_033950   Runt
RunxI

Related Sequences

 
mRNAGenPeptSwissProt
AF010284 AAB65409 Q08775
AF005936 AAB82419 Q08775
AF053951 AAC78623 Q08775
AF053956 AAC78626 Q08775
AF020681 AAD01649 Q9Z2T9
BC172607 AAI72607  
BC172715 AAI72715  
DQ458792 ABE68713 Q1PAG7
D14636 BAA03485 Q08775
D14637 BAA03486 Q08775

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Runx2 NP_001139510 H.sapiens RUNX2 860 Gene Info NP_001019801 99
R.norvegicus Runx2 367218   NP_445922 99
C.elegans rnt-1 172243   NP_491679 39

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)