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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Ntn1, netrin 1
Sequence ID:NM_008744
Entrez Gene ID:18208
Ensembl ID:ENSMUSG00000020902

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11 B3|11

Chromosomal Position (from UCSC)

Chromosomal Position:11: 68212991 - 68386136

NM_008744 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
2039906802286568026835
399140656804003768040111
406641196807095668071009
412042696807399868074147
427044586809092468091112
445955406819860468199685
554157576820011168200327

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9055906Full LengthBC141294netrin 1
4952261IncompleteBC029161netrin 1

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_008744 NP_032770 O09118  

Related Sequences

 
mRNAGenPeptSwissProt
U23505 AAA87938 O09118
U65418 AAC52971 O09118
AF128865 AAD28602 O09118
BC141294 AAI41295 O09118

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ntn1 NP_032770 R.norvegicus Ntn1 114523   NP_446183 100
H.sapiens NTN1 9423 Gene Info NP_004813 99
D.melanogaster NetB 32400   NP_001162753 56
C.elegans unc-6 180961   NP_509165 54

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)