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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Shox2, short stature homeobox 2
Sequence ID:NM_013665
Entrez Gene ID:20429
Ensembl ID:ENSMUSG00000027833

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3 E3-F1|3 31.6 cM

Chromosomal Position (from UCSC)

Chromosomal Position:3: 66971726 - 66981318

NM_013665 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
126866677719066777864
6877756677936566779453
7768336677977466779831
83410426678210766782315
104316036678513266785692

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100069442BC172634short stature homeobox 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_038693  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_013665 NP_038693 P70390 Homeobox
OAR

Related Sequences

 
mRNAGenPeptSwissProt
U66918 AAC52833 P70390
U67055 AAC52834 P70390
BC172634 AAI72634  
AK145063 BAE26214 Q3UM84

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Shox2 NP_038693 H.sapiens SHOX2 6474 Gene Info NP_003021 99
D.melanogaster CG34367 5740879   NP_001097140 53

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)