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Gene Info

Gene Information For:Mm. Cd47, CD47 antigen (Rh-related antigen, integrin-associated signal transducer)
Sequence ID:NM_010581
Entrez Gene ID:16423
Ensembl ID:ENSMUSG00000055447

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, synovium, t-cell, testis, thymus, uncharacterized tissue, uterus
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:16 B5|16

Chromosomal Position (from UCSC)

Chromosomal Position:16: 49855723 - 49911080

NM_010581 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11794985576649855944
1805274986787749868224
5285904986913049869192
5916804988427749884366
6817884989428949894396
7898814989548149895573
8829744989646849896560
97510674989815249898244
106810994990689349906924
110019144991098149911795

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4187965Full LengthBC012667CD47 antigen (Rh-related antigen, integrin-associated signal transducer)
3158056IncompleteBC009094CD47 antigen (Rh-related antigen, integrin-associated signal transducer)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_034711  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_010581 NP_034711   CD47
V-set_CD47

Related Sequences

 
mRNAGenPeptSwissProt
BC009094 AAH09094 Q61735
BC012667 AAH12667 Q61735
HQ585874 ADQ12919 E5Q371
AB012693 BAA25401 Q61735
AK050387 BAC34228 Q8C7F4
AK151922 BAE30800 Q61735
Q3U967
Z25524 CAA80978 Q61735

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Cd47 NP_034711 R.norvegicus Cd47 29364   NP_062068 92
H.sapiens CD47 961 Gene Info NP_001768 71

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)