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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Nr1d1, nuclear receptor subfamily 1, group D, member 1
Sequence ID:NM_145434
Entrez Gene ID:217166
Ensembl ID:ENSMUSG00000020889

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11 D|11

Chromosomal Position (from UCSC)

Chromosomal Position:11: 98771246 - 98775201

NM_145434 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
14859862924898629732
4866969863036298630572
6978829863101698631201
88315269863150198632144
152716719863251398632657
167217609863275098632838
176121029863310698633447
210326279863603198636555

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3585478Full LengthBC008989nuclear receptor subfamily 1, group D, member 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_663409  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_145434 NP_663409 Q3UV55 Hormone_recep
zf-C4

Related Sequences

 
mRNAGenPeptSwissProt
AF291821 AAG01345 Q3UV55
BC008989 AAH08989 Q3UV55
AK137398 BAE23342 Q3UV55
AK137582 BAE23418 Q3UV55
AK146430 BAE27164 Q3UV55
AK154931 BAE32932 Q3UV55
AK155597 BAE33339 Q3UV55
X86010 CAA59997 Q3UV55

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Nr1d1 NP_663409 R.norvegicus Nr1d1 252917   NP_001106893 98
H.sapiens NR1D1 9572 Gene Info NP_068370 96

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)