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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Purb, purine rich element binding protein B
Sequence ID:NM_011221
Entrez Gene ID:19291
Ensembl ID:ENSMUSG00000094483

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, pituitary gland, placenta, pooled tissue, prostate, retina, skin, spleen, stem cell, stomach, t-cell, testis, thymus, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:11 A1|11 3.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:11: 6474781 - 6475917

NM_011221 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
10114563747846375919

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100061743BC156317purine rich element binding protein B

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_035351  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_011221 NP_035351 O35295 PurA

Related Sequences

 
mRNAGenPeptSwissProt
AF017630 AAB71859 O35295
BC156317 AAI56318  
AK009365 BAB26244 Q9D7C3
AK049443 BAC33753 Q8BQK8
AK139376 BAE23982 Q3UTJ8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Purb NP_035351 R.norvegicus Purb 498407   NP_001017503 99
H.sapiens PURB 5814 Gene Info NP_150093 98
A.gambiae AgaP_AGAP010564 1275299   XP_314537 54
D.melanogaster Pur-alpha 43797   NP_524624 51
C.elegans plp-1 177540   NP_501241 41
A.thaliana PUR ALPHA-1 817768   NP_565736 40

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)