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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Pdgfd, platelet-derived growth factor, D polypeptide
Sequence ID:NM_027924
Entrez Gene ID:71785
Ensembl ID:ENSMUSG00000032006

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:9 A1|9

Chromosomal Position (from UCSC)

Chromosomal Position:9: 6168794 - 6377020

NM_027924 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
130761686116168917
30851262884716288675
51369362937566293936
69475663333236333385
75795563372426337440
956117063597026359916
1171179563768946377518

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4489485Full LengthBC030896platelet-derived growth factor, D polypeptide

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_082200  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_027924 NP_082200 Q925I7 CUB

Related Sequences

 
mRNAGenPeptSwissProt
BC030896 AAH30896 Q925I7
AF335583 AAK38839 Q925I7
AK003359 BAB22735 Q925I7
AK141551 BAE24732 Q925I7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Pdgfd NP_082200 R.norvegicus Pdgfd 66018   NP_076452 92
H.sapiens PDGFD 80310 Gene Info NP_079484 85

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)