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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Trim72, tripartite motif-containing 72
Sequence ID:NM_001079932
Entrez Gene ID:434246
Ensembl ID:ENSMUSG00000042828

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7 F3|7

Chromosomal Position (from UCSC)

Chromosomal Position:7: 128004476 - 128011387

NM_001079932 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1496135147891135148386
497592135151119135151214
593823135151300135151530
824846135151965135151987
847965135152585135152703
9662471135153400135154905

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9087507Full LengthBC147789tripartite motif-containing 72
9088185Full LengthBC158111tripartite motif-containing 72
9088192Full LengthBC158120tripartite motif-containing 72
30292516IncompleteBC067209tripartite motif-containing 72

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001079932 NP_001073401 Q1XH17  

Related Sequences

 
mRNAGenPeptSwissProt
BC067209 AAH67209 Q1XH17
BC147789 AAI47790 Q1XH17
BC158111 AAI58112 Q1XH17
BC158120 AAI58121 Q1XH17
AB231474 BAE93014 Q1XH17

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Trim72 NP_001073401 R.norvegicus Trim72 365377   NP_001071143 95
H.sapiens TRIM72 493829 Gene Info NP_001008275 91

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)