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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Lgi4, leucine-rich repeat LGI family, member 4
Sequence ID:NM_144556
Entrez Gene ID:243914
Ensembl ID:ENSMUSG00000036560

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7 B1|7 15.2 cM

Chromosomal Position (from UCSC)

Chromosomal Position:7: 31059934 - 31070742

NM_144556 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12563184495331845208
2573283184556931845640
3294003184609631846167
4014723184812231848193
4735443184830331848374
5457143184857831848747
7158793185211331852277
88013853185236131852866
138634443185389531855953

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30099294Full LengthBC098469leucine-rich repeat LGI family, member 4

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_653139  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_144556 NP_653139 Q8K1S1 LRR_1
EPTP

Related Sequences

 
mRNAGenPeptSwissProt
BC098469 AAH98469 Q4KMN2
AK134643 BAE22223 Q3UYI9
AJ487521 CAD31789 Q8K1S1
AJ487960 CAD32307 Q8K1S1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Lgi4 NP_653139 R.norvegicus Lgi4 361549   NP_955793 97
H.sapiens LGI4 163175 Gene Info NP_644813 88

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)