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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Mm. Pdx1, pancreatic and duodenal homeobox 1
Sequence ID:NM_008814
Entrez Gene ID:18609
Ensembl ID:ENSMUSG00000029644

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data

Cytogenetic Location (from UniGene)

Cytogenetic Location:5 G3|5 82.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:5: 147270125 - 147275847

NM_008814 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40045664Full LengthBC103581pancreatic and duodenal homeobox 1
40045665Full LengthBC105642pancreatic and duodenal homeobox 1
40045666Full LengthBC103582pancreatic and duodenal homeobox 1
40045668Full LengthBC103572pancreatic and duodenal homeobox 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_032840  

Protein Infomation

NM_008814 NP_032840 P52946 Homeobox

Related Sequences

L26239 AAA53037 Q6LEB3
BC103572 AAI03573 P52946
BC103581 AAI03582 P52946
BC103582 AAI03583 P52946
BC105642 AAI05643 P52946
AK020261 BAB32045 P52946
X74342 CAA52389 P52946

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
M.musculus Pdx1 NP_032840 H.sapiens PDX1 3651 Gene Info NP_000200 88

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)