Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Pdx1, pancreatic and duodenal homeobox 1
Sequence ID:NM_008814
Entrez Gene ID:18609
Ensembl ID:ENSMUSG00000029644

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5 G3|5 82.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:5: 147270125 - 147275847

NM_008814 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1517148081706148082222
5181287148085955148086724

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40045664Full LengthBC103581pancreatic and duodenal homeobox 1
40045665Full LengthBC105642pancreatic and duodenal homeobox 1
40045666Full LengthBC103582pancreatic and duodenal homeobox 1
40045668Full LengthBC103572pancreatic and duodenal homeobox 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_032840  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_008814 NP_032840 P52946 Homeobox

Related Sequences

 
mRNAGenPeptSwissProt
L26239 AAA53037 Q6LEB3
BC103572 AAI03573 P52946
BC103581 AAI03582 P52946
BC103582 AAI03583 P52946
BC105642 AAI05643 P52946
AK020261 BAB32045 P52946
X74342 CAA52389 P52946

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Pdx1 NP_032840 H.sapiens PDX1 3651 Gene Info NP_000200 88

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)