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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Gpr30, G protein-coupled receptor 30
Sequence ID:NM_029771
Entrez Gene ID:76854
Ensembl ID:ENSMUSG00000053647

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5|5 G1

Chromosomal Position (from UCSC)

Chromosomal Position:5: 139423276 - 139427789

NM_029771 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1176139899132139899307
177388139899614139899825
3892507139901633139903751

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8861618Full LengthBC138598G protein-coupled estrogen receptor 1
8861636Full LengthBC138616G protein-coupled estrogen receptor 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_084047  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_029771 NP_084047 Q8BMP4 7tm_1

Related Sequences

 
mRNAGenPeptSwissProt
BC138598 AAI38599 Q8BMP4
BC138616 AAI38617 Q8BMP4
AK018203 BAB31118 Q8BMP4
AK030375 BAC26930 Q8BMP4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Gpr30 NP_084047 R.norvegicus Gper 171104   NP_598257 98
H.sapiens GPER 2852 Gene Info NP_001496 87

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)