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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Ssh1, slingshot homolog 1 (Drosophila)
Sequence ID:NM_198109
Entrez Gene ID:231637
Ensembl ID:ENSMUSG00000042121

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5 F|5

Chromosomal Position (from UCSC)

Chromosomal Position:5: 113942218 - 113993757

 Exon Info From UCSC:
NM_198109

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5057022IncompleteBC051539slingshot homolog 1 (Drosophila)
5136213IncompleteBC046529slingshot homolog 1 (Drosophila)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_932777  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_198109 NP_932777 Q76I79 EC 3.1.3.16
EC 3.1.3.48
DSPc

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC046529 AAH46529 Q76I79 EC 3.1.3.16
EC 3.1.3.48
AB099287 BAC97810 Q76I79 EC 3.1.3.16
EC 3.1.3.48
AK173144 BAD32422 Q76I79 EC 3.1.3.16
EC 3.1.3.48
AK155557 BAE33323 Q76I79 EC 3.1.3.16
EC 3.1.3.48
AK170212 BAE41639 Q76I79 EC 3.1.3.16
EC 3.1.3.48
AK171556 BAE42524 Q76I79 EC 3.1.3.16
EC 3.1.3.48

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ssh1 NP_932777 R.norvegicus Ssh1 304580   NP_001100624 95
H.sapiens SSH1 54434 Gene Info NP_061857 85

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)