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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Hcn3, Hyperpolarization-activated, cyclic nucleotide-gated K+ 3
Sequence ID:NM_008227
Entrez Gene ID:15168
Ensembl ID:ENSMUSG00000028051

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3|3 F2

Chromosomal Position (from UCSC)

Chromosomal Position:3: 89148473 - 89149510

NM_008227 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
715318895069688952220
153216968895263888952802
169719378895373788953977
193820848895427688954422
208523038895478388955001
230424658895534688955507
246628958895655288956981
289632688896370688964078

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4511289Full LengthBC039156hyperpolarization-activated, cyclic nucleotide-gated K+ 3
8861339Full LengthBC138319hyperpolarization-activated, cyclic nucleotide-gated K+ 3
8861341Full LengthBC138321hyperpolarization-activated, cyclic nucleotide-gated K+ 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_032253  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_008227 NP_032253 O88705 cNMP_binding
Ion_trans
Ion_trans_N

Related Sequences

 
mRNAGenPeptSwissProt
AF064875 AAC40127 O70508
BC039156 AAH39156 O88705
BC138319 AAI38320 B2RRB5
BC138321 AAI38322 B2RRB5
AK032225 BAC27769 O88705
AJ225124 CAA12408 O88705

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Hcn3 NP_032253 R.norvegicus Hcn3 114245   NP_446137 99
H.sapiens HCN3 57657 Gene Info NP_065948 95
D.melanogaster Ih 36589   NP_001137668 60
A.gambiae AgaP_AGAP002150 1269408   XP_308045 59

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)