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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Tra2b, transformer 2 beta homolog (Drosophila)
Sequence ID:NM_009186
Entrez Gene ID:20462
Ensembl ID:ENSMUSG00000022858

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:16 B1|16 14.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:16: 22249118 - 22252660

NM_009186 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
111262224581322246938
112712002224726222247335
120112602224850822248567
126113442224912222249205
134514602225093722251052
146116492225267922252867
165018122225448022254642
181319462225505622255189
194721352226581322266001

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6594226Full LengthBC061177splicing factor, arginine/serine-rich 10 (transformer 2 homolog, Drosophila)
6828358Full LengthBC086795splicing factor, arginine/serine-rich 10 (transformer 2 homolog, Drosophila)
5343672IncompleteBC057996splicing factor, arginine/serine-rich 10 (transformer 2 homolog, Drosophila)

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_009186 NP_033212 P62996 RRM_1

Related Sequences

 
mRNAGenPeptSwissProt
BC061177 AAH61177 P62996
BC086795 AAH86795 Q5PR75
AK049573 BAC33819 P62996
AK077418 BAC36791 P62996
AK080378 BAC37898 P62996
X80232 CAA56518 P62996

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Tra2b NP_033212 H.sapiens TRA2B 6434 Gene Info NP_004584 100
R.norvegicus Tra2b 117259   NP_476460 100
D.melanogaster tra2 36619   NP_995834 51
C.elegans rsp-8 176613   NP_499533 49
A.thaliana AT4G35785 829732   NP_680768 41
N.crassa NCU04164 3876870   XP_960722 40
P.falciparum PF10_0028 810186   XP_001347313 37

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)