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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Polr3f, polymerase (RNA) III (DNA directed) polypeptide F
Sequence ID:NM_029763
Entrez Gene ID:70408
Ensembl ID:ENSMUSG00000027427

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2|2 H1

Chromosomal Position (from UCSC)

Chromosomal Position:2: 144527758 - 144539358

NM_029763 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1181144353480144353660
182299144354438144354555
300367144358089144358156
368435144358893144358960
436548144360034144360146
549692144361676144361819
693800144362018144362125
801992144362901144363092
9934160144364347144367514

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3602180Full LengthBC009159polymerase (RNA) III (DNA directed) polypeptide F

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_084039  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_029763 NP_084039 Q921X6 RNA_pol_Rpc34

Related Sequences

 
mRNAGenPeptSwissProt
BC009159 AAH09159 Q921X6
AK013084 BAB28638 Q9CZ23
AK029286 BAC26372 Q8C108
AK036166 BAC29327 Q921X6
AK076538 BAC36385 Q921X6
AK144679 BAE26008 Q921X6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Polr3f NP_084039 H.sapiens POLR3F 10621 Gene Info NP_006457 99
R.norvegicus Polr3f 311487   NP_001101254 99
D.melanogaster CG5380 42619   NP_651029 52
A.gambiae AgaP_AGAP011973 1280696   XP_320558 51
C.elegans W09C3.4 172081   NP_491427 36
S.cerevisiae RPC34 855737   NP_014400 31
S.pombe rpc34 2538992   NP_588398 31

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)