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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Ddb2, damage specific DNA binding protein 2
Sequence ID:NM_028119
Entrez Gene ID:107986
Ensembl ID:ENSMUSG00000002109

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2 E1|2

Chromosomal Position (from UCSC)

Chromosomal Position:2: 91211587 - 91236907

NM_028119 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
174459105174091052168
4464919105243691052481
4926569105260691052770
6577999105682291056964
8009779105720991057386
97810779105746391057562
107812239105890091059045
122414159107426491074455
141615529107497191075107
155319299107684691077222

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30933658Full LengthBC099410damage specific DNA binding protein 2
5360936IncompleteBC058589damage specific DNA binding protein 2
30139393IncompleteBC080821damage specific DNA binding protein 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_082395  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_028119 NP_082395 Q99J79 WD40

Related Sequences

 
mRNAGenPeptSwissProt
BC099410 AAH99410 Q4FZK4
AY027937 AAK16810 Q99J79
AK158770 BAE34654 Q4FZK4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ddb2 NP_082395 R.norvegicus LOC100362121 100362121   XP_002729243 96
H.sapiens DDB2 1643 Gene Info NP_000098 78
A.thaliana DDB2 835990   NP_200684 33

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)