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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Lrrc8a, leucine rich repeat containing 8A
Sequence ID:NM_177725
Entrez Gene ID:241296
Ensembl ID:ENSMUSG00000007476

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2 B|2

Chromosomal Position (from UCSC)

Chromosomal Position:2: 30257295 - 30263788

NM_177725 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1373009328830093324
381463009608830096196
14723113011068730112851
231242543011736730119309

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5290106IncompleteBC042710leucine rich repeat containing 8A
5708850IncompleteBC048152leucine rich repeat containing 8A

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_808393  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_177725 NP_808393 Q80WG5 LRR_1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Lrrc8a NP_808393 R.norvegicus Lrrc8a 311846   NP_001019953 100
H.sapiens LRRC8A 56262 Gene Info NP_001120716 99

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)