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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Traf5, TNF receptor-associated factor 5
Sequence ID:NM_011633
Entrez Gene ID:22033
Ensembl ID:ENSMUSG00000026637

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1 H6|1 105.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:1: 192055376 - 192092559

NM_011633 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1801193821087193821887
802972193823678193823848
11121204193878230193878322
12051279193881020193881094
12801357193881855193881932
13581522193882875193883039
15231624193886522193886623
16251682193890774193890831
16831901193894297193894515
19022210193916136193916444

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4218625Full LengthBC012702TNF receptor-associated factor 5

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_011633 NP_035763   zf-C3HC4
MATH
zf-TRAF

Related Sequences

 
mRNAGenPeptSwissProt
BC012702 AAH12702 P70191
Q3UMS9
D78141 BAA11218 P70191
D83528 BAA11942 P70191
Q3UMS9
AK144694 BAE26019 P70191
Q3UMS9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Traf5 NP_035763 H.sapiens TRAF5 7188 Gene Info NP_001029082 80
C.elegans trf-1 176767   NP_499773 32

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)