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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Apoa2, apolipoprotein A-II
Sequence ID:NM_013474
Entrez Gene ID:11807
Ensembl ID:ENSMUSG00000005681

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1 H3|1 92.6 cM

Chromosomal Position (from UCSC)

Chromosomal Position:1: 171225091 - 171226375

NM_013474 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
168173155184173155251
69151173155414173155496
152284173155796173155928
285521173156273173156509

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4195958Full LengthBC031786apolipoprotein A-II

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_038502  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_013474 NP_038502 Q6LD55
P09813
ApoA-II

Related Sequences

 
mRNAGenPeptSwissProt
M79361 AAA37249 P09813
M79362 AAA37250 Q6LD55
P09813
S79794 AAB35391 Q6LD55
P09813
BC031786 AAH31786 Q6LD55
P09813
AK145823 BAE26675 P09813
X04119 CAA27731 Q6LD55
P09813
X62772 CAA44616 P09813

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Apoa2 NP_038502 R.norvegicus Apoa2 25649   NP_037244 73
H.sapiens APOA2 336 Gene Info NP_001634 64

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)