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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Angptl1, angiopoietin-like 1
Sequence ID:NM_028333
Entrez Gene ID:72713
Ensembl ID:ENSMUSG00000033544

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1 H1|1

Chromosomal Position (from UCSC)

Chromosomal Position:1: 156838941 - 156845615

NM_028333 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1215158769153158769367
2161061158774710158775555
10621255158787213158787406
12561526158788490158788760
15272190158790545158791208

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30607749Full LengthBC082563angiopoietin-like 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_082609  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_028333 NP_082609 Q640P2 Fibrinogen_C

Related Sequences

 
mRNAGenPeptSwissProt
BC082563 AAH82563 Q640P2
AK012888 BAB28537 Q640P2
AK027978 BAC25687 Q8BMV1
AK142319 BAE25028 Q640P2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Angptl1 NP_082609 H.sapiens ANGPTL1 9068 Gene Info NP_004664 93

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)