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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Col4a3, collagen, type IV, alpha 3
Sequence ID:NM_007734
Entrez Gene ID:12828
Ensembl ID:ENSMUSG00000079465

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1 C5|1

Chromosomal Position (from UCSC)

Chromosomal Position:1: 82586975 - 82721268

 Exon Info From UCSC:
NM_007734

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_031760  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_007734 NP_031760 Q9QZS0 Collagen
C4

Related Sequences

 
mRNAGenPeptSwissProt
AF169387 AAD50449 Q9QZS0
AK033387 BAC28260 Q9QZS0
X82205 CAA57689 Q9QZS0
Z35166 CAA84529 Q9QZS0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Col4a3 NP_031760 R.norvegicus Col4a3 363265   NP_001129231 89
H.sapiens COL4A3 1285 Gene Info NP_000082 79

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta