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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Lgsn, lengsin, lens protein with glutamine synthetase domain
Sequence ID:NM_153601
Entrez Gene ID:266744
Ensembl ID:ENSMUSG00000050217

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1 B|1

Chromosomal Position (from UCSC)

Chromosomal Position:1: 31176434 - 31204725

NM_153601 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1463123327931233324
471793124621031246342
1803413124720731247368
3425083125362631253792
50919033126017531261569

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40090416Full LengthBC128067lengsin, lens protein with glutamine synthetase domain
40090427Full LengthBC117745lengsin, lens protein with glutamine synthetase domain
40090429Full LengthBC117746lengsin, lens protein with glutamine synthetase domain

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_705829  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_153601 NP_705829 Q8CIX8 Gln-synt_C

Related Sequences

 
mRNAGenPeptSwissProt
BC117745 AAI17746 Q8CIX8
BC117746 AAI17747 Q8CIX8
BC128067 AAI28068 Q8CIX8
AF545851 AAN38298 Q8CIX8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Lgsn NP_705829 R.norvegicus Lgsn 316304   NP_852048 94
H.sapiens LGSN 51557 Gene Info NP_057655 80
A.thaliana AT3G53180 824484   NP_190886 26
N.crassa NCU11239 3881213   XP_965073 25

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)