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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Arf5, ADP-ribosylation factor 5
Sequence ID:NM_007480
Entrez Gene ID:11844
Ensembl ID:ENSMUSG00000020440

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6 A3.3|6

Chromosomal Position (from UCSC)

Chromosomal Position:6: 28423688 - 28425843

NM_007480 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11162837363928373754
1171972837428928374369
1983072837472128374830
3083792837517228375243
3805052837573828375863
5069332837607128376498

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8861778Full LengthBC138756ADP-ribosylation factor 5
40130729Full LengthBC132452ADP-ribosylation factor 5

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_031506  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_007480 NP_031506 P84084 Arf

Related Sequences

 
mRNAGenPeptSwissProt
BC132452 AAI32453 P84084
BC138756 AAI38757 P84084
D87902 BAA13494 P84084

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Arf5 NP_031506 H.sapiens ARF5 381 Gene Info NP_001653 100
R.norvegicus Arf5 79117   NP_077063 100
C.elegans arf-3 177595   NP_501336 85
A.gambiae AgaP_AGAP002931 1273032   XP_311973 84
D.melanogaster Arf102F 43823   NP_524631 84

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)