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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Sntg1, syntrophin, gamma 1
Sequence ID:NM_027671
Entrez Gene ID:71096
Ensembl ID:ENSMUSG00000025909

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1 A1-A2|1

Chromosomal Position (from UCSC)

Chromosomal Position:1: 8362875 - 9298573

 Exon Info From UCSC:
NM_027671

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100063934Full LengthBC160286syntrophin, gamma 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_081947  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_027671 NP_081947 Q8BNW6 PDZ

Related Sequences

 
mRNAGenPeptSwissProt
BC160286 AAI60286  
AF367759 AAK53399 Q925E1
AK016927 BAB30501 Q925E1
AK038698 BAC30104 Q8CAI8
AK038832 BAC30143 Q8CAG0
AK080034 BAC37809 Q8BNW6
AK083241 BAC38825 Q8C415

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Sntg1 NP_081947 H.sapiens SNTG1 54212 Gene Info NP_061840 94
R.norvegicus Sntg1 500394   XP_575753 94
A.gambiae AgaP_AGAP006633 1277220   XP_316665 42
D.melanogaster Syn2 36848   NP_725587 41
C.elegans stn-2 181029   NP_001024610 35

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)