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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Gata5, GATA binding protein 5
Sequence ID:NM_008093
Entrez Gene ID:14464
Ensembl ID:ENSMUSG00000015627

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2 H4|2 106.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:2: 180326275 - 180334699

NM_008093 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11933180059792180061724
19342058180062059180062183
20592146180062464180062551
21472272180063011180063136
22732448180067000180067175
24493302180068530180069383

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40046621Full LengthBC105655GATA binding protein 5
40046622Full LengthBC105654GATA binding protein 5
40046623Full LengthBC105653GATA binding protein 5

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_032119  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_008093 NP_032119 P97489 GATA
GATA-N

Related Sequences

 
mRNAGenPeptSwissProt
U84725 AAB47506 P97489
BC105653 AAI05654 Q0VGJ0
BC105654 AAI05655 Q0VGI9
BC105655 AAI05656 Q0VGI8
AK132020 BAE20945 P97489
AK142213 BAE24979 P97489

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Gata5 NP_032119 R.norvegicus Gata5 499951   NP_001019487 94
H.sapiens GATA5 140628 Gene Info NP_536721 77

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)