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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Hacl1, 2-hydroxyacyl-CoA lyase 1
Sequence ID:NM_019975
Entrez Gene ID:56794
Ensembl ID:ENSMUSG00000021884

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:14 B|14

Chromosomal Position (from UCSC)

Chromosomal Position:14: 31607859 - 31640963

 Exon Info From UCSC:
NM_019975

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5011451Full LengthBC0213602-hydroxyacyl-CoA lyase 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_064359  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_019975 NP_064359 Q9QXE0 TPP_enzyme_M
TPP_enzyme_C
TPP_enzyme_N

Related Sequences

 
mRNAGenPeptSwissProt
BC021360 AAH21360 Q9QXE0
AK005505 BAB24085 Q9QXE0
AK041686 BAC31032 Q9QXE0
AK050078 BAC34059 Q9QXE0
AJ132139 CAB65550 Q9QXE0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Hacl1 NP_064359 R.norvegicus Hacl1 85255   NP_445945 92
H.sapiens HACL1 26061 Gene Info NP_036392 88
D.melanogaster CG11208 37285   NP_611460 56
A.gambiae AgaP_AGAP010368 1272675   XP_311576 54
C.elegans B0334.3 174758   NP_496454 49
S.pombe SPBC725.04 2541142   NP_595484 45
A.thaliana AT5G17380 831604   NP_197240 43
S.cerevisiae YEL020C 856694   NP_010895 41

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)