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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Trpm1, transient receptor potential cation channel, subfamily M, member 1
Sequence ID:NM_001039104
NM_018752
Entrez Gene ID:17364
Ensembl ID:ENSMUSG00000030523

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7 C|7 27.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:7: 64185589 - 64224748

 Exon Info From UCSC:
NM_001039104
NM_018752

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100068120Full LengthBC167220transient receptor potential cation channel, subfamily M, member 1

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001039104 NP_001034193 Q2TV84  
NM_018752 NP_061222    

Related Sequences

 
mRNAGenPeptSwissProt
AF047714 AAC13683 Q2TV84
BC082560 AAH82560 Q2TV84
BC085168 AAH85168 Q2TV84
BC167220 AAI67220  
AY180104 AAO43093 Q2TV84
AK148094 BAE28340 Q2TV84
AK148268 BAE28448 Q2TV84
AK148275 BAE28453 Q2TV84
AK149290 BAE28794 Q2TV84
AK164395 BAE37771 Q2TV84
AJ867481 CAI30140 Q2TV84

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Trpm1 NP_001034193 R.norvegicus Trpm1 361586   NP_001032822 97
H.sapiens TRPM1 4308 Gene Info NP_002411 88

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)